The Duck Chugger · Garden Science

The Tomato Family Tree,
For People Who Grow Them

The definitive account of wild tomatoes β€” 17 species, three sections, and the strange fact that nobody has ever found the garden tomato growing truly wild β€” was published as a 186-page monograph in 2008. This is that monograph, distilled for people with dirt under their fingernails. Every claim traces to it, and every chart is live.

A note on what you're looking at: the source is Peralta, Spooner & Knapp 2008, Taxonomy of Wild Tomatoes and their Relatives (Systematic Botany Monographs 84). Unlike the pepper monograph behind our sister article, this one is copyrighted β€” not Creative Commons β€” so nothing on this page is reproduced from it. Every tree, map, and diagram below is redrawn from scratch using the monograph's data, and all photographs come from separately credited CC-licensed sources. The book itself is freely downloadable from the authors.

Read the monograph (PDF) →

The article · read it through

The interactives · jump to any one

Your tomato is a Solanum β€” and the weird one in its family

DNA settled a 250-year argument: tomatoes sit deep inside the genus Solanum, sister to the potatoes. Linnaeus named the tomato Solanum lycopersicum in 1753 and was right the first time. Its whole family lives in western South America β€” Andean slopes, coastal fog deserts, cloud forests, and the GalΓ‘pagos β€” and by wild-tomato standards, everything about your garden plant is exotic: the red fruit, the self-pollinating flower, the annual lifestyle, even its existence outside South America.

Counts and claims: Peralta, Spooner & Knapp 2008 (abstract, introduction, and economic-value chapters).

01

The family tree

Two outgroup sections β€” desert shrubs and cloud-forest lianas β€” then the 13 true tomatoes in four informal groups. Notice where color lives: only the youngest branch, the Lycopersicon group, makes red or orange fruit. Green, striped, and fuzzy is the family default. The crop and its lookalike, the currant tomato, are sister species at the very tip.

Click any species name for its full profile · click empty tree space to zoom in (double-click resets, scroll & drag to pan) · click a group chip to isolate and zoom to that group · πŸ… marks the crop.

Click a group to isolate it. Hover any species for its story.

Topology redrawn from the monograph's summary of molecular evidence (its Fig. 18 and Species Relationships chapter). The deepest split inside the true tomatoes β€” whether S. pennellii or S. habrochaites branches first β€” remains genuinely unresolved; morphology favors S. pennellii, drawn here.

02

Where tomatoes actually come from

Every wild relative is packed into western South America and the GalΓ‘pagos β€” most of them into Peru alone. The crop is the exception: it exists only in cultivation, and even the monograph's authors can't say whether people first domesticated it in Peru, in Mexico, or in both places independently. There are no archaeological tomato remains anywhere. For a crop this important, that's a remarkable hole in the record.

Everything here is clickable β€” big markers tell the stories (including both domestication hypotheses), small dots open each wild species' full profile · positions are approximate range centers redrawn from the monograph's distribution maps.
03

From wolf peach to your garden

The tomato reached Europe as a suspected poison filed next to the mandrake, got named after a fruit Galen described that it could not possibly be, and spent 240 years in the wrong genus. It's been an eventful five centuries.

Click any event to expand it. Spacing is by event, not to scale.

The colored-fruited four

Of seventeen species, only these four ripen red, orange, or yellow β€” the crop, its free-crossing wild twin, and two island endemics Darwin collected. Everything else in the family ripens green.

04

The rebuilt flower

Tomato flowers pay in pollen only β€” there's no nectar β€” and the pollen is locked inside a cone of fused anthers that has to be vibrated open. Bumblebees and other native bees do this expertly; honeybees physically can't. So when tomatoes reached a Europe with no buzz-pollinating bee service, only the flowers that could pollinate themselves set fruit β€” and generation by generation, growers unknowingly selected the stigma down inside the cone. The self-pollinating tomato flower is a domestication artifact, made by an absence of bees.

Toggle the two flower types, then hover (or tap) each part of the flower.

Diagram drawn from the monograph's flower descriptions and its account of Rick's (1995) stigma-position work. The same wild-to-selfing shift happens naturally at wild species' range edges β€” the crop just did it under human management.

05

Will it cross with your tomato?

Charles Rick spent decades answering exactly this, and the pattern he found still rules breeding: an Esculentum complex that crosses with the crop, and a Peruvianum complex that mostly refuses β€” the barrier isn't just the flower, it's the endosperm arithmetic (a 2:1 maternal-to-paternal balance the hybrid seed must satisfy). Plus one species that only donates pollen one way, and two that have never crossed with anything.

Hover or tap a species for the details; click through for its full profile.

From the monograph's breeding-systems chapter, Rick's crossability complexes, and the EBN analysis it reviews (Ehlenfeldt & Hanneman 1992). "Lab help" = embryo rescue.

06

Volunteer detective: currant tomato or escaped cherry?

Here's the monograph's most useful myth-bust: the "wild cherry tomato" is not the wild ancestor. The plants long called "var. cerasiforme" are a scramble of feral crop escapes and crop-wild hybrids β€” which is why the monograph refuses to recognize the name. So what IS that vigorous little volunteer in your compost pile? The authors use a seven-point rule of thumb to separate true S. pimpinellifolium from escaped S. lycopersicum; a majority of marks carries the verdict. Try it on your plant.

Checklist translated from the identification rule in the monograph's S. pimpinellifolium treatment. Hybrids are common where the species meet β€” a mixed scorecard usually means exactly that.

What the wilds gave your garden

Modern selfing bottlenecked the crop's genetics hard β€” and wild species have been paying the debt back for eighty years. If your seed packet mentions nematode, mildew, or virus resistance, a wild tomato from Peru is in the pedigree. The germplasm lives at UC Davis's Tomato Genetics Resource Center, founded by Rick from these very species.

Click any card for the species' full profile.

What this means in your garden

The monograph, translated to dirt

  • The "main stem" is a relay, not a pole. Tomatoes grow in repeating segments, each ending in a flower truss with a side shoot taking over β€” that's why trusses sit "between" leaves and why suckering is a choice, not a repair.
  • Your annual is a captive perennial. The wild relatives are woody-based perennials; frost is what makes yours die. Overwintering a plant or cuttings is letting it be what it is.
  • Determinate = human invention. No wild tomato stops climbing. If your indeterminate heirloom is eating the trellis, it's being authentic.
  • Vibration sets fruit. No nectar, buzz-release pollen: bumblebees are the pros, honeybees are useless here, and a midday flick of the truss (or an electric toothbrush in the greenhouse) does what the missing bees would.
  • Most specimens will self β€” but not all. The monograph calls the crop autogamous but facultatively outcrossing: the included stigma makes selfing the default, not a guarantee, and a few percent of bee-carried crosses in a real garden is normal. Older cultivars, exserted-stigma types, and anything grown beside currant tomatoes drift higher still.
  • That volunteer isn't a wild ancestor. "Wild cherry tomatoes" are escaped crop genetics. Enjoy them; just don't romance them.
  • The wilds are the insurance policy. Salt tolerance from a lava-field tomato, drought genes from a fog-desert one, nematode resistance from one that needed embryo rescue to cross β€” conserving the wild species IS tomato breeding's future.

Sources & credits

How this page was made

This is a grower-focused distillation of a single primary source: the 2008 wild-tomato monograph. Because that work is copyrighted (not Creative Commons), this page reproduces none of its figures or photographs. The family tree, map, timeline, flower diagram, and crossing guide are all redrawn from scratch out of the monograph's data, keys, and text; species photographs are separately sourced under CC licenses and credited where they appear. Claims about pollination, mating systems, and crossability cite the studies collected in the monograph's review chapters, listed below.

References

  1. Peralta IE, Spooner DM, Knapp S (2008). Taxonomy of Wild Tomatoes and their Relatives (Solanum sect. Lycopersicoides, sect. Juglandifolia, sect. Lycopersicon; Solanaceae). Systematic Botany Monographs 84:1–186. Free PDF from the Spooner lab β€” the source for this entire page.
  2. Peralta IE, Knapp S, Spooner DM (2005). New species of wild tomatoes from northern Peru. Systematic Botany 30:424–434 β€” the splits behind S. arcanum and S. huaylasense.
  3. Rick CM (1979, 1995) and five decades of crossing work reviewed in the monograph β€” behind Interactives 04 and 05; the Tomato Genetics Resource Center (tgrc.ucdavis.edu) continues it.
  4. Nesbitt TC & Tanksley SD (2002). Comparative sequencing in Lycopersicon. Genetics 162:365–379 β€” why "var. cerasiforme" is a mixture, not an ancestor.
  5. Ehlenfeldt MK & Hanneman RE (1992). Endosperm Balance Number analysis β€” the arithmetic behind the crossing barriers.
  6. Darwin SC, Knapp S, Peralta IE (2003). Taxonomy of tomatoes in the GalΓ‘pagos Islands. Systematics and Biodiversity 1:29–53 β€” S. galapagense recognized.
  7. Spooner DM, Peralta IE, Knapp S (2005) and the molecular studies reviewed in the monograph β€” tomatoes back into Solanum.